Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf20Q5DTM8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.65■■□□□ 1.06
Rnf20Q5DTM8 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.64■■□□□ 1.06
Rnf20Q5DTM8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf20Q5DTM8 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf20Q5DTM8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf20Q5DTM8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf20Q5DTM8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Rnf20Q5DTM8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Gm6211-202ENSMUST00000167849 925 ntBASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Grk6-206ENSMUST00000224995 2971 ntBASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf20Q5DTM8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms