Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Gm12441-201ENSMUST00000121806 588 ntBASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap2Q3V1H1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Flg-201ENSMUST00000050758 1488 ntBASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Dio3-201ENSMUST00000097228 1449 ntBASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.9■□□□□ 0.94
Ckap2Q3V1H1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ckap2Q3V1H1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap2Q3V1H1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap2Q3V1H1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Gm2559-201ENSMUST00000201323 363 ntBASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Fst-202ENSMUST00000223640 2612 ntBASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap2Q3V1H1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap2Q3V1H1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms