Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28047Q3US59 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Gm28047Q3US59 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Gm28047Q3US59 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28047Q3US59 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28047Q3US59 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.7■□□□□ 0.9
Gm28047Q3US59 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.7■□□□□ 0.9
Gm28047Q3US59 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.7■□□□□ 0.9
Gm28047Q3US59 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28047Q3US59 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28047Q3US59 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28047Q3US59 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28047Q3US59 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gm28047Q3US59 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28047Q3US59 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Gm18284-201ENSMUST00000172604 624 ntBASIC20.67■□□□□ 0.9
Gm28047Q3US59 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm28047Q3US59 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28047Q3US59 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Gm10849-201ENSMUST00000100397 618 ntBASIC20.66■□□□□ 0.9
Gm28047Q3US59 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.66■□□□□ 0.9
Gm28047Q3US59 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Gm28047Q3US59 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28047Q3US59 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Gm28047Q3US59 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Gm28047Q3US59 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28047Q3US59 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms