Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1brtQ3UNC9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1brtQ3UNC9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1brtQ3UNC9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1brtQ3UNC9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms