Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cul4aQ3TCH7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cul4aQ3TCH7 Gm22325-201ENSMUST00000158904 308 ntBASIC19.1■□□□□ 0.65
Cul4aQ3TCH7 Gm8969-201ENSMUST00000199694 526 ntBASIC19.1■□□□□ 0.65
Cul4aQ3TCH7 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.1■□□□□ 0.65
Cul4aQ3TCH7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cul4aQ3TCH7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cul4aQ3TCH7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.1■□□□□ 0.65
Cul4aQ3TCH7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cul4aQ3TCH7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cul4aQ3TCH7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cul4aQ3TCH7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cul4aQ3TCH7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cul4aQ3TCH7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Cul4aQ3TCH7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cul4aQ3TCH7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cul4aQ3TCH7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cul4aQ3TCH7 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.08■□□□□ 0.64
Cul4aQ3TCH7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cul4aQ3TCH7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cul4aQ3TCH7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Cul4aQ3TCH7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cul4aQ3TCH7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cul4aQ3TCH7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms