Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Gm29518-201ENSMUST00000190858 372 ntBASIC18.31■□□□□ 0.52
Smad4P97471 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.31■□□□□ 0.52
Smad4P97471 Gm21559-201ENSMUST00000220638 855 ntBASIC18.31■□□□□ 0.52
Smad4P97471 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smad4P97471 Gm8587-201ENSMUST00000076538 843 ntBASIC18.31■□□□□ 0.52
Smad4P97471 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smad4P97471 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smad4P97471 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smad4P97471 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.3■□□□□ 0.52
Smad4P97471 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.3■□□□□ 0.52
Smad4P97471 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Gm5867-201ENSMUST00000063197 592 ntBASIC18.3■□□□□ 0.52
Smad4P97471 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Smad4P97471 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smad4P97471 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smad4P97471 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.29■□□□□ 0.52
Smad4P97471 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smad4P97471 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smad4P97471 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.29■□□□□ 0.52
Smad4P97471 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.29■□□□□ 0.52
Smad4P97471 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.29■□□□□ 0.52
Smad4P97471 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.29■□□□□ 0.52
Smad4P97471 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.29■□□□□ 0.52
Smad4P97471 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smad4P97471 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smad4P97471 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smad4P97471 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smad4P97471 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smad4P97471 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smad4P97471 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smad4P97471 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smad4P97471 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.28■□□□□ 0.52
Smad4P97471 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Gm18958-201ENSMUST00000174258 762 ntBASIC18.28■□□□□ 0.52
Smad4P97471 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.28■□□□□ 0.52
Smad4P97471 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.28■□□□□ 0.52
Smad4P97471 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smad4P97471 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smad4P97471 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.27■□□□□ 0.52
Smad4P97471 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smad4P97471 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smad4P97471 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smad4P97471 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smad4P97471 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smad4P97471 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smad4P97471 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smad4P97471 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.26■□□□□ 0.51
Smad4P97471 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Gm17808-201ENSMUST00000200859 894 ntBASIC18.26■□□□□ 0.51
Smad4P97471 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.26■□□□□ 0.51
Smad4P97471 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.26■□□□□ 0.51
Smad4P97471 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smad4P97471 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smad4P97471 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smad4P97471 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
Smad4P97471 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.25■□□□□ 0.51
Smad4P97471 Gm43514-201ENSMUST00000198852 424 ntBASIC18.25■□□□□ 0.51
Smad4P97471 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smad4P97471 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smad4P97471 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smad4P97471 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smad4P97471 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smad4P97471 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Smad4P97471 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smad4P97471 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smad4P97471 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.24■□□□□ 0.51
Smad4P97471 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.24■□□□□ 0.51
Smad4P97471 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smad4P97471 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smad4P97471 Mzt1-203ENSMUST00000227948 952 ntBASIC18.24■□□□□ 0.51
Smad4P97471 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smad4P97471 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.24■□□□□ 0.51
Smad4P97471 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smad4P97471 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smad4P97471 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Smad4P97471 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms