Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Odf3b-204ENSMUST00000227834 930 ntBASIC23.22■■□□□ 1.31
Msh6P54276 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Msh6P54276 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Msh6P54276 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Msh6P54276 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Msh6P54276 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Msh6P54276 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Msh6P54276 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Msh6P54276 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Msh6P54276 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Msh6P54276 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Msh6P54276 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC23.21■■□□□ 1.31
Msh6P54276 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Msh6P54276 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Msh6P54276 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Msh6P54276 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.2■■□□□ 1.3
Msh6P54276 Gm11539-201ENSMUST00000119837 557 ntBASIC23.2■■□□□ 1.3
Msh6P54276 Gm13436-201ENSMUST00000120418 567 ntBASIC23.2■■□□□ 1.3
Msh6P54276 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC23.2■■□□□ 1.3
Msh6P54276 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.2■■□□□ 1.3
Msh6P54276 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Msh6P54276 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Msh6P54276 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Msh6P54276 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Msh6P54276 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Msh6P54276 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Msh6P54276 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Msh6P54276 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Msh6P54276 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
Msh6P54276 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Msh6P54276 Gm43231-201ENSMUST00000202960 2258 ntBASIC23.18■■□□□ 1.3
Msh6P54276 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Msh6P54276 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Msh6P54276 Gm15375-201ENSMUST00000119510 849 ntBASIC23.18■■□□□ 1.3
Msh6P54276 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23.18■■□□□ 1.3
Msh6P54276 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.18■■□□□ 1.3
Msh6P54276 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Msh6P54276 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Msh6P54276 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Msh6P54276 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Msh6P54276 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msh6P54276 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msh6P54276 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Msh6P54276 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Msh6P54276 Gm3375-201ENSMUST00000203929 796 ntBASIC23.17■■□□□ 1.3
Msh6P54276 Gm45560-201ENSMUST00000211492 1472 ntBASIC23.17■■□□□ 1.3
Msh6P54276 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23.17■■□□□ 1.3
Msh6P54276 AC124581.1-201ENSMUST00000225416 1399 ntBASIC23.17■■□□□ 1.3
Msh6P54276 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Msh6P54276 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msh6P54276 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msh6P54276 Gm10819-201ENSMUST00000099988 561 ntBASIC23.17■■□□□ 1.3
Msh6P54276 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Msh6P54276 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msh6P54276 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msh6P54276 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Msh6P54276 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Msh6P54276 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.16■■□□□ 1.3
Msh6P54276 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Msh6P54276 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Msh6P54276 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Msh6P54276 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Msh6P54276 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Msh6P54276 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Msh6P54276 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Msh6P54276 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC23.15■■□□□ 1.3
Msh6P54276 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Msh6P54276 Gm37292-201ENSMUST00000192062 758 ntBASIC23.15■■□□□ 1.3
Msh6P54276 Gm38285-201ENSMUST00000192928 922 ntBASIC23.15■■□□□ 1.3
Msh6P54276 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC23.15■■□□□ 1.3
Msh6P54276 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Msh6P54276 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC23.15■■□□□ 1.3
Msh6P54276 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Msh6P54276 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Msh6P54276 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.15■■□□□ 1.3
Msh6P54276 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Msh6P54276 Gm6659-201ENSMUST00000174752 547 ntBASIC23.14■■□□□ 1.3
Msh6P54276 Gm7889-201ENSMUST00000185591 958 ntBASIC23.14■■□□□ 1.3
Msh6P54276 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23.14■■□□□ 1.3
Msh6P54276 Gm42545-201ENSMUST00000202755 922 ntBASIC23.14■■□□□ 1.3
Msh6P54276 AC156016.1-201ENSMUST00000227190 1035 ntBASIC23.14■■□□□ 1.3
Msh6P54276 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Msh6P54276 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
Msh6P54276 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Msh6P54276 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC23.14■■□□□ 1.3
Msh6P54276 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Msh6P54276 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Msh6P54276 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC23.14■■□□□ 1.3
Msh6P54276 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Msh6P54276 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Msh6P54276 Gm38308-201ENSMUST00000194934 1809 ntBASIC23.14■■□□□ 1.29
Msh6P54276 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Msh6P54276 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Msh6P54276 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Msh6P54276 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC23.14■■□□□ 1.29
Msh6P54276 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Msh6P54276 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC23.14■■□□□ 1.29
Msh6P54276 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC23.14■■□□□ 1.29
Msh6P54276 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Msh6P54276 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms