Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brca1P48754 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Brca1P48754 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.62■□□□□ 0.89
Brca1P48754 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.62■□□□□ 0.89
Brca1P48754 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Brca1P48754 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Gm27463-201ENSMUST00000183569 57 ntBASIC20.62■□□□□ 0.89
Brca1P48754 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brca1P48754 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Brca1P48754 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Brca1P48754 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.61■□□□□ 0.89
Brca1P48754 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brca1P48754 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brca1P48754 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Brca1P48754 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.61■□□□□ 0.89
Brca1P48754 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brca1P48754 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Brca1P48754 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brca1P48754 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brca1P48754 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Brca1P48754 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.6■□□□□ 0.89
Brca1P48754 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brca1P48754 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brca1P48754 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brca1P48754 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Brca1P48754 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Brca1P48754 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.6■□□□□ 0.89
Brca1P48754 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brca1P48754 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brca1P48754 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Brca1P48754 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.59■□□□□ 0.89
Brca1P48754 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Brca1P48754 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brca1P48754 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Brca1P48754 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Brca1P48754 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.58■□□□□ 0.89
Brca1P48754 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.58■□□□□ 0.89
Brca1P48754 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.58■□□□□ 0.89
Brca1P48754 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Brca1P48754 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Brca1P48754 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brca1P48754 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Brca1P48754 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brca1P48754 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brca1P48754 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.57■□□□□ 0.88
Brca1P48754 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.57■□□□□ 0.88
Brca1P48754 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.57■□□□□ 0.88
Brca1P48754 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.57■□□□□ 0.88
Brca1P48754 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.57■□□□□ 0.88
Brca1P48754 Gm12085-201ENSMUST00000119263 940 ntBASIC20.57■□□□□ 0.88
Brca1P48754 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Brca1P48754 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brca1P48754 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brca1P48754 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.56■□□□□ 0.88
Brca1P48754 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.56■□□□□ 0.88
Brca1P48754 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.56■□□□□ 0.88
Brca1P48754 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brca1P48754 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brca1P48754 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brca1P48754 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brca1P48754 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brca1P48754 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.55■□□□□ 0.88
Brca1P48754 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.55■□□□□ 0.88
Brca1P48754 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brca1P48754 Gm7461-201ENSMUST00000058918 827 ntBASIC20.55■□□□□ 0.88
Brca1P48754 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brca1P48754 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brca1P48754 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Brca1P48754 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.55■□□□□ 0.88
Brca1P48754 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brca1P48754 Gm28033-201ENSMUST00000184224 96 ntBASIC20.55■□□□□ 0.88
Brca1P48754 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.55■□□□□ 0.88
Brca1P48754 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.55■□□□□ 0.88
Brca1P48754 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Brca1P48754 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brca1P48754 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms