Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx2P43241 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdx2P43241 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdx2P43241 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdx2P43241 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdx2P43241 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.33■□□□□ 0.36
Cdx2P43241 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Cdx2P43241 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.33■□□□□ 0.36
Cdx2P43241 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cdx2P43241 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.33■□□□□ 0.36
Cdx2P43241 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdx2P43241 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx2P43241 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cdx2P43241 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdx2P43241 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.32■□□□□ 0.36
Cdx2P43241 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.32■□□□□ 0.36
Cdx2P43241 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx2P43241 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdx2P43241 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdx2P43241 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdx2P43241 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdx2P43241 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdx2P43241 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx2P43241 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdx2P43241 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cdx2P43241 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Cdx2P43241 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx2P43241 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdx2P43241 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Gm18959-201ENSMUST00000208954 655 ntBASIC17.29■□□□□ 0.36
Cdx2P43241 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.29■□□□□ 0.36
Cdx2P43241 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx2P43241 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx2P43241 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx2P43241 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx2P43241 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx2P43241 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx2P43241 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx2P43241 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx2P43241 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx2P43241 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdx2P43241 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdx2P43241 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdx2P43241 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdx2P43241 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdx2P43241 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdx2P43241 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx2P43241 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdx2P43241 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx2P43241 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx2P43241 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdx2P43241 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdx2P43241 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cdx2P43241 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.27■□□□□ 0.35
Cdx2P43241 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdx2P43241 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms