Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HttP42859 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.63■□□□□ 0.73
HttP42859 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HttP42859 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HttP42859 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HttP42859 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.62■□□□□ 0.73
HttP42859 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HttP42859 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Mir3081-201ENSMUST00000175305 84 ntBASIC19.62■□□□□ 0.73
HttP42859 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HttP42859 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HttP42859 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HttP42859 Gm7791-201ENSMUST00000219066 539 ntBASIC19.61■□□□□ 0.73
HttP42859 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.61■□□□□ 0.73
HttP42859 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HttP42859 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HttP42859 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Gm6623-201ENSMUST00000173570 544 ntBASIC19.6■□□□□ 0.73
HttP42859 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.6■□□□□ 0.73
HttP42859 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.6■□□□□ 0.73
HttP42859 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HttP42859 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.6■□□□□ 0.73
HttP42859 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HttP42859 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Gm7370-201ENSMUST00000219471 767 ntBASIC19.59■□□□□ 0.73
HttP42859 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.59■□□□□ 0.73
HttP42859 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HttP42859 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.59■□□□□ 0.73
HttP42859 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Gm37935-201ENSMUST00000192012 982 ntBASIC19.59■□□□□ 0.73
HttP42859 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HttP42859 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HttP42859 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HttP42859 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HttP42859 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HttP42859 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HttP42859 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HttP42859 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.58■□□□□ 0.72
HttP42859 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HttP42859 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.58■□□□□ 0.72
HttP42859 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HttP42859 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.57■□□□□ 0.72
HttP42859 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HttP42859 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HttP42859 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HttP42859 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HttP42859 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.57■□□□□ 0.72
HttP42859 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HttP42859 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HttP42859 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.56■□□□□ 0.72
HttP42859 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.56■□□□□ 0.72
HttP42859 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HttP42859 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HttP42859 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.56■□□□□ 0.72
HttP42859 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HttP42859 Gm27742-201ENSMUST00000184667 60 ntBASIC19.56■□□□□ 0.72
HttP42859 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.56■□□□□ 0.72
HttP42859 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HttP42859 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms