Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc1P35601 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rfc1P35601 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rfc1P35601 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc1P35601 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rfc1P35601 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rfc1P35601 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.15■□□□□ 0.66
Rfc1P35601 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rfc1P35601 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.15■□□□□ 0.66
Rfc1P35601 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc1P35601 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Rfc1P35601 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.14■□□□□ 0.66
Rfc1P35601 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfc1P35601 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfc1P35601 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Rfc1P35601 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc1P35601 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc1P35601 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.14■□□□□ 0.65
Rfc1P35601 Gm21956-201ENSMUST00000179946 522 ntBASIC19.14■□□□□ 0.65
Rfc1P35601 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.14■□□□□ 0.65
Rfc1P35601 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.14■□□□□ 0.65
Rfc1P35601 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc1P35601 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.14■□□□□ 0.65
Rfc1P35601 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc1P35601 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc1P35601 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Gm13241-201ENSMUST00000094493 780 ntBASIC19.13■□□□□ 0.65
Rfc1P35601 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rfc1P35601 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc1P35601 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rfc1P35601 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc1P35601 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc1P35601 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.12■□□□□ 0.65
Rfc1P35601 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc1P35601 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfc1P35601 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc1P35601 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.12■□□□□ 0.65
Rfc1P35601 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rfc1P35601 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rfc1P35601 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.12■□□□□ 0.65
Rfc1P35601 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc1P35601 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rfc1P35601 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc1P35601 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc1P35601 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc1P35601 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.11■□□□□ 0.65
Rfc1P35601 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc1P35601 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc1P35601 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rfc1P35601 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.11■□□□□ 0.65
Rfc1P35601 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.11■□□□□ 0.65
Rfc1P35601 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc1P35601 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Rfc1P35601 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Rfc1P35601 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rfc1P35601 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rfc1P35601 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rfc1P35601 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfc1P35601 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms