Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Sftpa1P35242 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sftpa1P35242 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sftpa1P35242 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sftpa1P35242 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.83■□□□□ 0.28
Sftpa1P35242 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sftpa1P35242 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sftpa1P35242 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sftpa1P35242 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.82■□□□□ 0.28
Sftpa1P35242 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sftpa1P35242 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sftpa1P35242 Gm10013-201ENSMUST00000106074 672 ntBASIC16.82■□□□□ 0.28
Sftpa1P35242 Gm6345-202ENSMUST00000180900 204 ntBASIC16.82■□□□□ 0.28
Sftpa1P35242 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sftpa1P35242 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sftpa1P35242 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sftpa1P35242 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sftpa1P35242 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sftpa1P35242 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sftpa1P35242 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.81■□□□□ 0.28
Sftpa1P35242 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Sftpa1P35242 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.81■□□□□ 0.28
Sftpa1P35242 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sftpa1P35242 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.8■□□□□ 0.28
Sftpa1P35242 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sftpa1P35242 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.8■□□□□ 0.28
Sftpa1P35242 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.8■□□□□ 0.28
Sftpa1P35242 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.79■□□□□ 0.28
Sftpa1P35242 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.79■□□□□ 0.28
Sftpa1P35242 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.79■□□□□ 0.28
Sftpa1P35242 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.79■□□□□ 0.28
Sftpa1P35242 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sftpa1P35242 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.78■□□□□ 0.28
Sftpa1P35242 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Sftpa1P35242 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 AA414768-201ENSMUST00000121924 1257 ntBASIC16.78■□□□□ 0.28
Sftpa1P35242 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.78■□□□□ 0.28
Sftpa1P35242 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.78■□□□□ 0.28
Sftpa1P35242 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sftpa1P35242 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sftpa1P35242 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sftpa1P35242 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sftpa1P35242 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sftpa1P35242 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sftpa1P35242 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.77■□□□□ 0.28
Sftpa1P35242 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.77■□□□□ 0.28
Sftpa1P35242 Gm33142-201ENSMUST00000193913 867 ntBASIC16.77■□□□□ 0.28
Sftpa1P35242 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Gm18032-201ENSMUST00000222541 538 ntBASIC16.77■□□□□ 0.28
Sftpa1P35242 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sftpa1P35242 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Sftpa1P35242 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms