Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccl6P27784 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccl6P27784 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl6P27784 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccl6P27784 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Gm10849-201ENSMUST00000100397 618 ntBASIC14.18□□□□□ -0.14
Ccl6P27784 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccl6P27784 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl6P27784 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.17□□□□□ -0.14
Ccl6P27784 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl6P27784 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.17□□□□□ -0.14
Ccl6P27784 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.17□□□□□ -0.14
Ccl6P27784 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ccl6P27784 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ccl6P27784 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ccl6P27784 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl6P27784 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Fst-202ENSMUST00000223640 2612 ntBASIC14.16□□□□□ -0.14
Ccl6P27784 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccl6P27784 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccl6P27784 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Gm8495-201ENSMUST00000188740 694 ntBASIC14.16□□□□□ -0.14
Ccl6P27784 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.16□□□□□ -0.14
Ccl6P27784 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl6P27784 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccl6P27784 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccl6P27784 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl6P27784 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccl6P27784 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ccl6P27784 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccl6P27784 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccl6P27784 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl6P27784 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl6P27784 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl6P27784 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl6P27784 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl6P27784 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl6P27784 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl6P27784 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl6P27784 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms