Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.65■□□□□ 0.74
Irf8P23611 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Irf8P23611 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.65■□□□□ 0.74
Irf8P23611 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf8P23611 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf8P23611 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf8P23611 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Irf8P23611 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.64■□□□□ 0.73
Irf8P23611 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.64■□□□□ 0.73
Irf8P23611 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.64■□□□□ 0.73
Irf8P23611 Dio3-201ENSMUST00000097228 1449 ntBASIC19.64■□□□□ 0.73
Irf8P23611 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf8P23611 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf8P23611 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf8P23611 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf8P23611 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.64■□□□□ 0.73
Irf8P23611 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf8P23611 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf8P23611 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Irf8P23611 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Irf8P23611 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Irf8P23611 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.63■□□□□ 0.73
Irf8P23611 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.63■□□□□ 0.73
Irf8P23611 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.63■□□□□ 0.73
Irf8P23611 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf8P23611 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf8P23611 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf8P23611 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Irf8P23611 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Irf8P23611 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.62■□□□□ 0.73
Irf8P23611 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.62■□□□□ 0.73
Irf8P23611 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Irf8P23611 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf8P23611 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Irf8P23611 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Irf8P23611 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.61■□□□□ 0.73
Irf8P23611 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Irf8P23611 Gm29257-201ENSMUST00000186115 639 ntBASIC19.61■□□□□ 0.73
Irf8P23611 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.61■□□□□ 0.73
Irf8P23611 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Irf8P23611 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf8P23611 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
Irf8P23611 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.6■□□□□ 0.73
Irf8P23611 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.6■□□□□ 0.73
Irf8P23611 Gm20049-201ENSMUST00000219950 730 ntBASIC19.6■□□□□ 0.73
Irf8P23611 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.6■□□□□ 0.73
Irf8P23611 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf8P23611 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.59■□□□□ 0.73
Irf8P23611 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Irf8P23611 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf8P23611 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.59■□□□□ 0.73
Irf8P23611 Gm11927-201ENSMUST00000118472 759 ntBASIC19.59■□□□□ 0.73
Irf8P23611 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf8P23611 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf8P23611 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf8P23611 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf8P23611 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Irf8P23611 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf8P23611 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.59■□□□□ 0.73
Irf8P23611 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Irf8P23611 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.58■□□□□ 0.73
Irf8P23611 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf8P23611 Gm12896-201ENSMUST00000118430 226 ntBASIC19.58■□□□□ 0.72
Irf8P23611 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf8P23611 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.58■□□□□ 0.72
Irf8P23611 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms