Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgn1P18608 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.67■□□□□ 0.26
Hmgn1P18608 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.66■□□□□ 0.26
Hmgn1P18608 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.66■□□□□ 0.26
Hmgn1P18608 Gm38205-201ENSMUST00000192243 258 ntBASIC16.66■□□□□ 0.26
Hmgn1P18608 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.66■□□□□ 0.26
Hmgn1P18608 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn1P18608 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.65■□□□□ 0.26
Hmgn1P18608 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hmgn1P18608 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn1P18608 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.65■□□□□ 0.26
Hmgn1P18608 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn1P18608 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn1P18608 Gm8493-201ENSMUST00000196881 489 ntBASIC16.65■□□□□ 0.26
Hmgn1P18608 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn1P18608 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.65■□□□□ 0.26
Hmgn1P18608 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hmgn1P18608 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn1P18608 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn1P18608 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.65■□□□□ 0.26
Hmgn1P18608 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Hmgn1P18608 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.64■□□□□ 0.25
Hmgn1P18608 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn1P18608 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Hmgn1P18608 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmgn1P18608 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.63■□□□□ 0.25
Hmgn1P18608 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hmgn1P18608 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Hmgn1P18608 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.63■□□□□ 0.25
Hmgn1P18608 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.63■□□□□ 0.25
Hmgn1P18608 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.63■□□□□ 0.25
Hmgn1P18608 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn1P18608 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hmgn1P18608 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Hmgn1P18608 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.62■□□□□ 0.25
Hmgn1P18608 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.62■□□□□ 0.25
Hmgn1P18608 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Hmgn1P18608 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgn1P18608 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Hmgn1P18608 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.61■□□□□ 0.25
Hmgn1P18608 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.61■□□□□ 0.25
Hmgn1P18608 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgn1P18608 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hmgn1P18608 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms