Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cntn1P12960 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cntn1P12960 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.43■□□□□ 0.38
Cntn1P12960 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cntn1P12960 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Gm5643-201ENSMUST00000117081 966 ntBASIC17.42■□□□□ 0.38
Cntn1P12960 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.42■□□□□ 0.38
Cntn1P12960 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.42■□□□□ 0.38
Cntn1P12960 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.42■□□□□ 0.38
Cntn1P12960 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.42■□□□□ 0.38
Cntn1P12960 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cntn1P12960 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Cntn1P12960 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.41■□□□□ 0.38
Cntn1P12960 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Cntn1P12960 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cntn1P12960 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.41■□□□□ 0.38
Cntn1P12960 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Cntn1P12960 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.41■□□□□ 0.38
Cntn1P12960 Gm10812-201ENSMUST00000099864 546 ntBASIC17.41■□□□□ 0.38
Cntn1P12960 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Flg-201ENSMUST00000050758 1488 ntBASIC17.41■□□□□ 0.38
Cntn1P12960 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Cntn1P12960 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cntn1P12960 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cntn1P12960 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
Cntn1P12960 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.39■□□□□ 0.37
Cntn1P12960 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cntn1P12960 Gm11927-201ENSMUST00000118472 759 ntBASIC17.39■□□□□ 0.37
Cntn1P12960 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.39■□□□□ 0.37
Cntn1P12960 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cntn1P12960 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cntn1P12960 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cntn1P12960 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.39■□□□□ 0.37
Cntn1P12960 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cntn1P12960 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cntn1P12960 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cntn1P12960 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cntn1P12960 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cntn1P12960 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.38■□□□□ 0.37
Cntn1P12960 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cntn1P12960 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.38■□□□□ 0.37
Cntn1P12960 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.38■□□□□ 0.37
Cntn1P12960 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.38■□□□□ 0.37
Cntn1P12960 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.38■□□□□ 0.37
Cntn1P12960 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cntn1P12960 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.38■□□□□ 0.37
Cntn1P12960 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cntn1P12960 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.37■□□□□ 0.37
Cntn1P12960 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.37■□□□□ 0.37
Cntn1P12960 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cntn1P12960 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.37■□□□□ 0.37
Cntn1P12960 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.37■□□□□ 0.37
Cntn1P12960 Gm18666-201ENSMUST00000190039 958 ntBASIC17.37■□□□□ 0.37
Cntn1P12960 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cntn1P12960 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cntn1P12960 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms