Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl1P10146 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccl1P10146 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl1P10146 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccl1P10146 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccl1P10146 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccl1P10146 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.16□□□□□ -0.14
Ccl1P10146 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl1P10146 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccl1P10146 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl1P10146 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccl1P10146 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccl1P10146 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl1P10146 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl1P10146 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl1P10146 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl1P10146 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ccl1P10146 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl1P10146 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccl1P10146 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl1P10146 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.15□□□□□ -0.14
Ccl1P10146 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.15□□□□□ -0.15
Ccl1P10146 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccl1P10146 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccl1P10146 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.14□□□□□ -0.15
Ccl1P10146 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccl1P10146 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ccl1P10146 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl1P10146 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl1P10146 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccl1P10146 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccl1P10146 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl1P10146 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ccl1P10146 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccl1P10146 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ccl1P10146 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.12□□□□□ -0.15
Ccl1P10146 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccl1P10146 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccl1P10146 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl1P10146 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl1P10146 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl1P10146 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl1P10146 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl1P10146 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccl1P10146 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl1P10146 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl1P10146 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl1P10146 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccl1P10146 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccl1P10146 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.11□□□□□ -0.15
Ccl1P10146 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms