Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.55□□□□□ -0.4
Smim1P0C8K7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.55□□□□□ -0.4
Smim1P0C8K7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.55□□□□□ -0.4
Smim1P0C8K7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smim1P0C8K7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.54□□□□□ -0.4
Smim1P0C8K7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim1P0C8K7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Smim1P0C8K7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim1P0C8K7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smim1P0C8K7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim1P0C8K7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms