Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a2P08122 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.09■□□□□ 0.33
Col4a2P08122 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.09■□□□□ 0.33
Col4a2P08122 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a2P08122 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a2P08122 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a2P08122 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a2P08122 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a2P08122 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a2P08122 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Col4a2P08122 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a2P08122 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.08■□□□□ 0.32
Col4a2P08122 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Col4a2P08122 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a2P08122 Mir6349-201ENSMUST00000184059 97 ntBASIC17.07■□□□□ 0.32
Col4a2P08122 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col4a2P08122 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col4a2P08122 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.07■□□□□ 0.32
Col4a2P08122 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col4a2P08122 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a2P08122 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a2P08122 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.06■□□□□ 0.32
Col4a2P08122 Golph3-205ENSMUST00000228671 2842 ntBASIC17.06■□□□□ 0.32
Col4a2P08122 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col4a2P08122 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a2P08122 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a2P08122 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a2P08122 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a2P08122 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a2P08122 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a2P08122 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a2P08122 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.05■□□□□ 0.32
Col4a2P08122 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a2P08122 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a2P08122 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a2P08122 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a2P08122 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a2P08122 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.05■□□□□ 0.32
Col4a2P08122 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a2P08122 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a2P08122 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a2P08122 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Gm7367-201ENSMUST00000057611 492 ntBASIC17.04■□□□□ 0.32
Col4a2P08122 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.04■□□□□ 0.32
Col4a2P08122 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Col4a2P08122 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a2P08122 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a2P08122 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col4a2P08122 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a2P08122 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Col4a2P08122 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a2P08122 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col4a2P08122 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a2P08122 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.03■□□□□ 0.32
Col4a2P08122 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 Gm18032-201ENSMUST00000222541 538 ntBASIC17.03■□□□□ 0.32
Col4a2P08122 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a2P08122 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a2P08122 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col4a2P08122 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col4a2P08122 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms