Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.26■□□□□ 0.19
Hdac3O88895 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.26■□□□□ 0.19
Hdac3O88895 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.26■□□□□ 0.19
Hdac3O88895 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hdac3O88895 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hdac3O88895 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hdac3O88895 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hdac3O88895 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.25■□□□□ 0.19
Hdac3O88895 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.25■□□□□ 0.19
Hdac3O88895 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.25■□□□□ 0.19
Hdac3O88895 Gm5874-201ENSMUST00000096101 508 ntBASIC16.25■□□□□ 0.19
Hdac3O88895 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hdac3O88895 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hdac3O88895 Gm15039-201ENSMUST00000118914 875 ntBASIC16.24■□□□□ 0.19
Hdac3O88895 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hdac3O88895 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.24■□□□□ 0.19
Hdac3O88895 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.24■□□□□ 0.19
Hdac3O88895 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hdac3O88895 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.23■□□□□ 0.19
Hdac3O88895 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Gm42642-201ENSMUST00000200683 355 ntBASIC16.23■□□□□ 0.19
Hdac3O88895 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.23■□□□□ 0.19
Hdac3O88895 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hdac3O88895 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hdac3O88895 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.23■□□□□ 0.19
Hdac3O88895 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hdac3O88895 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hdac3O88895 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hdac3O88895 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Gm8495-201ENSMUST00000188740 694 ntBASIC16.22■□□□□ 0.19
Hdac3O88895 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Hdac3O88895 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hdac3O88895 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac3O88895 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hdac3O88895 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac3O88895 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Hdac3O88895 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac3O88895 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms