Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.95■□□□□ 0.46
Pdlim1O70400 Gm38285-201ENSMUST00000192928 922 ntBASIC17.95■□□□□ 0.46
Pdlim1O70400 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Zfp783-201ENSMUST00000095946 670 ntBASIC17.95■□□□□ 0.46
Pdlim1O70400 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.95■□□□□ 0.46
Pdlim1O70400 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.94■□□□□ 0.46
Pdlim1O70400 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.94■□□□□ 0.46
Pdlim1O70400 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pdlim1O70400 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim1O70400 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim1O70400 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pdlim1O70400 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Gm12896-201ENSMUST00000118430 226 ntBASIC17.92■□□□□ 0.46
Pdlim1O70400 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.92■□□□□ 0.46
Pdlim1O70400 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pdlim1O70400 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim1O70400 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pdlim1O70400 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim1O70400 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.91■□□□□ 0.46
Pdlim1O70400 Tgds-204ENSMUST00000228543 1594 ntBASIC17.91■□□□□ 0.46
Pdlim1O70400 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.91■□□□□ 0.46
Pdlim1O70400 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pdlim1O70400 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Pdlim1O70400 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Gm12527-201ENSMUST00000117967 564 ntBASIC17.9■□□□□ 0.46
Pdlim1O70400 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.9■□□□□ 0.46
Pdlim1O70400 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.9■□□□□ 0.46
Pdlim1O70400 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.9■□□□□ 0.46
Pdlim1O70400 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.9■□□□□ 0.46
Pdlim1O70400 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Pdlim1O70400 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim1O70400 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Pdlim1O70400 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Pdlim1O70400 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.89■□□□□ 0.45
Pdlim1O70400 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Pdlim1O70400 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.89■□□□□ 0.45
Pdlim1O70400 Gm11927-201ENSMUST00000118472 759 ntBASIC17.89■□□□□ 0.45
Pdlim1O70400 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Pdlim1O70400 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.89■□□□□ 0.45
Pdlim1O70400 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pdlim1O70400 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms