Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itgb3O54890 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Itgb3O54890 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Itgb3O54890 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Itgb3O54890 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Itgb3O54890 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Itgb3O54890 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Itgb3O54890 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Itgb3O54890 Gm13158-201ENSMUST00000122007 736 ntBASIC19.28■□□□□ 0.68
Itgb3O54890 Gm18666-201ENSMUST00000190039 958 ntBASIC19.28■□□□□ 0.68
Itgb3O54890 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.28■□□□□ 0.68
Itgb3O54890 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Itgb3O54890 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Itgb3O54890 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.28■□□□□ 0.68
Itgb3O54890 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.28■□□□□ 0.68
Itgb3O54890 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Itgb3O54890 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb3O54890 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.27■□□□□ 0.68
Itgb3O54890 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.27■□□□□ 0.68
Itgb3O54890 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.27■□□□□ 0.68
Itgb3O54890 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb3O54890 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.27■□□□□ 0.68
Itgb3O54890 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb3O54890 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb3O54890 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb3O54890 Mtag2-201ENSMUST00000058665 714 ntBASIC19.27■□□□□ 0.68
Itgb3O54890 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb3O54890 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Itgb3O54890 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.27■□□□□ 0.68
Itgb3O54890 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.27■□□□□ 0.67
Itgb3O54890 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Itgb3O54890 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Itgb3O54890 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Itgb3O54890 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.26■□□□□ 0.67
Itgb3O54890 Gm38285-201ENSMUST00000192928 922 ntBASIC19.26■□□□□ 0.67
Itgb3O54890 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.26■□□□□ 0.67
Itgb3O54890 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Itgb3O54890 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb3O54890 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Itgb3O54890 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.25■□□□□ 0.67
Itgb3O54890 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.25■□□□□ 0.67
Itgb3O54890 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Itgb3O54890 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Gm10812-201ENSMUST00000099864 546 ntBASIC19.25■□□□□ 0.67
Itgb3O54890 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.25■□□□□ 0.67
Itgb3O54890 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.25■□□□□ 0.67
Itgb3O54890 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb3O54890 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.24■□□□□ 0.67
Itgb3O54890 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Itgb3O54890 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Itgb3O54890 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Itgb3O54890 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.24■□□□□ 0.67
Itgb3O54890 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Itgb3O54890 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.24■□□□□ 0.67
Itgb3O54890 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.24■□□□□ 0.67
Itgb3O54890 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb3O54890 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb3O54890 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb3O54890 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Itgb3O54890 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb3O54890 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Itgb3O54890 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Itgb3O54890 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb3O54890 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb3O54890 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb3O54890 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb3O54890 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Itgb3O54890 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Itgb3O54890 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.22■□□□□ 0.67
Itgb3O54890 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.22■□□□□ 0.67
Itgb3O54890 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Itgb3O54890 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms