Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm2O35900 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm2O35900 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm2O35900 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm2O35900 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Lsm2O35900 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm2O35900 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm2O35900 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm2O35900 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.22■□□□□ 0.19
Lsm2O35900 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lsm2O35900 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Lsm2O35900 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm2O35900 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm2O35900 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm2O35900 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Lsm2O35900 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lsm2O35900 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lsm2O35900 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.2■□□□□ 0.18
Lsm2O35900 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.2■□□□□ 0.18
Lsm2O35900 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.2■□□□□ 0.18
Lsm2O35900 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm2O35900 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.2■□□□□ 0.18
Lsm2O35900 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Gm11421-201ENSMUST00000122124 294 ntBASIC16.19■□□□□ 0.18
Lsm2O35900 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.19■□□□□ 0.18
Lsm2O35900 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Lsm2O35900 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lsm2O35900 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm2O35900 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lsm2O35900 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lsm2O35900 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Lsm2O35900 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.18■□□□□ 0.18
Lsm2O35900 Smad6-203ENSMUST00000179458 273 ntBASIC16.18■□□□□ 0.18
Lsm2O35900 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.18■□□□□ 0.18
Lsm2O35900 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.18■□□□□ 0.18
Lsm2O35900 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lsm2O35900 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.18■□□□□ 0.18
Lsm2O35900 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Lsm2O35900 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Lsm2O35900 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm2O35900 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Lsm2O35900 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lsm2O35900 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Lsm2O35900 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lsm2O35900 Gm43137-201ENSMUST00000198052 594 ntBASIC16.17■□□□□ 0.18
Lsm2O35900 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lsm2O35900 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.17■□□□□ 0.18
Lsm2O35900 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm2O35900 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms