Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.21□□□□□ -0.14
Tnfsf11O35235 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf11O35235 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.2□□□□□ -0.14
Tnfsf11O35235 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.2□□□□□ -0.14
Tnfsf11O35235 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf11O35235 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Gm14117-201ENSMUST00000122417 843 ntBASIC14.19□□□□□ -0.14
Tnfsf11O35235 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.19□□□□□ -0.14
Tnfsf11O35235 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf11O35235 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf11O35235 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.17□□□□□ -0.14
Tnfsf11O35235 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf11O35235 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf11O35235 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfsf11O35235 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf11O35235 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms