Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ClockO08785 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClockO08785 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClockO08785 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClockO08785 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ClockO08785 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.27■□□□□ 0.36
ClockO08785 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClockO08785 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClockO08785 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClockO08785 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClockO08785 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClockO08785 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ClockO08785 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClockO08785 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ClockO08785 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.26■□□□□ 0.35
ClockO08785 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ClockO08785 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClockO08785 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ClockO08785 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.26■□□□□ 0.35
ClockO08785 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.25■□□□□ 0.35
ClockO08785 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ClockO08785 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClockO08785 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ClockO08785 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ClockO08785 Gm7860-201ENSMUST00000121190 879 ntBASIC17.24■□□□□ 0.35
ClockO08785 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ClockO08785 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ClockO08785 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.24■□□□□ 0.35
ClockO08785 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ClockO08785 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClockO08785 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ClockO08785 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ClockO08785 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ClockO08785 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.23■□□□□ 0.35
ClockO08785 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClockO08785 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.22■□□□□ 0.35
ClockO08785 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ClockO08785 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClockO08785 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.21■□□□□ 0.35
ClockO08785 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ClockO08785 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ClockO08785 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClockO08785 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms