Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tcof1O08784 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.32■■□□□ 1
Tcof1O08784 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tcof1O08784 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tcof1O08784 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Tcof1O08784 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.32■■□□□ 1
Tcof1O08784 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tcof1O08784 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.32■■□□□ 1
Tcof1O08784 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tcof1O08784 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.32■■□□□ 1
Tcof1O08784 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcof1O08784 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.31■■□□□ 1
Tcof1O08784 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tcof1O08784 Gm10812-201ENSMUST00000099864 546 ntBASIC21.31■■□□□ 1
Tcof1O08784 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.31■■□□□ 1
Tcof1O08784 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcof1O08784 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcof1O08784 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcof1O08784 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcof1O08784 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcof1O08784 Gm11927-201ENSMUST00000118472 759 ntBASIC21.3■■□□□ 1
Tcof1O08784 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Tcof1O08784 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.3■■□□□ 1
Tcof1O08784 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tcof1O08784 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.3■■□□□ 1
Tcof1O08784 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tcof1O08784 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tcof1O08784 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tcof1O08784 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tcof1O08784 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.29■■□□□ 1
Tcof1O08784 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tcof1O08784 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Tcof1O08784 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tcof1O08784 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tcof1O08784 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.29■■□□□ 1
Tcof1O08784 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Tcof1O08784 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.29■■□□□ 1
Tcof1O08784 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Tcof1O08784 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcof1O08784 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tcof1O08784 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.28■■□□□ 1
Tcof1O08784 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.28■■□□□ 1
Tcof1O08784 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.28■■□□□ 1
Tcof1O08784 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcof1O08784 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tcof1O08784 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tcof1O08784 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Tcof1O08784 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.27■■□□□ 1
Tcof1O08784 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tcof1O08784 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tcof1O08784 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tcof1O08784 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tcof1O08784 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.26■□□□□ 0.99
Tcof1O08784 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.26■□□□□ 0.99
Tcof1O08784 Flg-201ENSMUST00000050758 1488 ntBASIC21.26■□□□□ 0.99
Tcof1O08784 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Tcof1O08784 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Tcof1O08784 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Gm5643-201ENSMUST00000117081 966 ntBASIC21.26■□□□□ 0.99
Tcof1O08784 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcof1O08784 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.25■□□□□ 0.99
Tcof1O08784 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Tcof1O08784 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Tcof1O08784 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.25■□□□□ 0.99
Tcof1O08784 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Tcof1O08784 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcof1O08784 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms