Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.47■□□□□ 0.39
Polr2jO08740 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr2jO08740 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr2jO08740 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.47■□□□□ 0.39
Polr2jO08740 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Polr2jO08740 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr2jO08740 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr2jO08740 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Polr2jO08740 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr2jO08740 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.47■□□□□ 0.39
Polr2jO08740 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr2jO08740 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Polr2jO08740 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.46■□□□□ 0.39
Polr2jO08740 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Polr2jO08740 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.46■□□□□ 0.39
Polr2jO08740 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Polr2jO08740 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Polr2jO08740 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.46■□□□□ 0.39
Polr2jO08740 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Polr2jO08740 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Polr2jO08740 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.45■□□□□ 0.38
Polr2jO08740 Gm45417-201ENSMUST00000209533 758 ntBASIC17.45■□□□□ 0.38
Polr2jO08740 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.45■□□□□ 0.38
Polr2jO08740 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.45■□□□□ 0.38
Polr2jO08740 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.45■□□□□ 0.38
Polr2jO08740 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.45■□□□□ 0.38
Polr2jO08740 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Polr2jO08740 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Polr2jO08740 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.44■□□□□ 0.38
Polr2jO08740 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.44■□□□□ 0.38
Polr2jO08740 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.44■□□□□ 0.38
Polr2jO08740 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.44■□□□□ 0.38
Polr2jO08740 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.44■□□□□ 0.38
Polr2jO08740 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Polr2jO08740 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Polr2jO08740 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Polr2jO08740 Gm43060-201ENSMUST00000200621 289 ntBASIC17.43■□□□□ 0.38
Polr2jO08740 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.43■□□□□ 0.38
Polr2jO08740 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2jO08740 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.43■□□□□ 0.38
Polr2jO08740 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.43■□□□□ 0.38
Polr2jO08740 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Polr2jO08740 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.42■□□□□ 0.38
Polr2jO08740 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2jO08740 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2jO08740 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2jO08740 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2jO08740 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2jO08740 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.41■□□□□ 0.38
Polr2jO08740 Tgds-204ENSMUST00000228543 1594 ntBASIC17.41■□□□□ 0.38
Polr2jO08740 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.41■□□□□ 0.38
Polr2jO08740 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2jO08740 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2jO08740 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms