Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shank1D3YZU1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shank1D3YZU1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shank1D3YZU1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank1D3YZU1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.25■□□□□ 0.19
Shank1D3YZU1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Shank1D3YZU1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Shank1D3YZU1 AA414768-201ENSMUST00000121924 1257 ntBASIC16.24■□□□□ 0.19
Shank1D3YZU1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.24■□□□□ 0.19
Shank1D3YZU1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.24■□□□□ 0.19
Shank1D3YZU1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shank1D3YZU1 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.24■□□□□ 0.19
Shank1D3YZU1 Gm17971-201ENSMUST00000190239 806 ntBASIC16.24■□□□□ 0.19
Shank1D3YZU1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.24■□□□□ 0.19
Shank1D3YZU1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Shank1D3YZU1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank1D3YZU1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank1D3YZU1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank1D3YZU1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank1D3YZU1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank1D3YZU1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shank1D3YZU1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shank1D3YZU1 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.22■□□□□ 0.19
Shank1D3YZU1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shank1D3YZU1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.21■□□□□ 0.19
Shank1D3YZU1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Gm45058-201ENSMUST00000205810 766 ntBASIC16.2■□□□□ 0.18
Shank1D3YZU1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms