Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.27■□□□□ 0.68
Rfx8D3YU81 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.27■□□□□ 0.68
Rfx8D3YU81 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx8D3YU81 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Rfx8D3YU81 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.26■□□□□ 0.67
Rfx8D3YU81 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.26■□□□□ 0.67
Rfx8D3YU81 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.26■□□□□ 0.67
Rfx8D3YU81 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx8D3YU81 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx8D3YU81 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.24■□□□□ 0.67
Rfx8D3YU81 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rfx8D3YU81 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx8D3YU81 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfx8D3YU81 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfx8D3YU81 Gm22325-201ENSMUST00000158904 308 ntBASIC19.24■□□□□ 0.67
Rfx8D3YU81 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.24■□□□□ 0.67
Rfx8D3YU81 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfx8D3YU81 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rfx8D3YU81 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.24■□□□□ 0.67
Rfx8D3YU81 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx8D3YU81 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx8D3YU81 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx8D3YU81 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Gm26524-201ENSMUST00000192339 390 ntBASIC19.23■□□□□ 0.67
Rfx8D3YU81 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx8D3YU81 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rfx8D3YU81 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.22■□□□□ 0.67
Rfx8D3YU81 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.22■□□□□ 0.67
Rfx8D3YU81 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.22■□□□□ 0.67
Rfx8D3YU81 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rfx8D3YU81 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx8D3YU81 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx8D3YU81 Gm5408-201ENSMUST00000197998 747 ntBASIC19.21■□□□□ 0.67
Rfx8D3YU81 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms