Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a6B1AVK5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a6B1AVK5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.9■□□□□ 0.62
Col4a6B1AVK5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a6B1AVK5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a6B1AVK5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a6B1AVK5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.89■□□□□ 0.61
Col4a6B1AVK5 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a6B1AVK5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a6B1AVK5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Col4a6B1AVK5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a6B1AVK5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col4a6B1AVK5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a6B1AVK5 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.83■□□□□ 0.61
Col4a6B1AVK5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a6B1AVK5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a6B1AVK5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a6B1AVK5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a6B1AVK5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a6B1AVK5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Ank2-226ENSMUST00000189368 339 ntBASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms