Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv20A0A0B4J1H5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Tgds-204ENSMUST00000228543 1594 ntBASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv20A0A0B4J1H5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.29■□□□□ 0.2
Trbv20A0A0B4J1H5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv20A0A0B4J1H5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv20A0A0B4J1H5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv20A0A0B4J1H5 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms