Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Gm11927-201ENSMUST00000118472 759 ntBASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv12-1A0A0B4J1H0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm20049-201ENSMUST00000219950 730 ntBASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm12896-201ENSMUST00000118430 226 ntBASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms