Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-2A0A075B638 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Gm15820-201ENSMUST00000201566 728 ntBASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav4-2A0A075B638 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4-2A0A075B638 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4-2A0A075B638 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav4-2A0A075B638 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms