Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Gm7889-201ENSMUST00000185591 958 ntBASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Golph3-202ENSMUST00000226517 2359 ntBASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8n-2A0A075B633 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8n-2A0A075B633 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8n-2A0A075B633 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Gm21362-201ENSMUST00000194272 928 ntBASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8n-2A0A075B633 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8n-2A0A075B633 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav8n-2A0A075B633 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms