Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-1A0A075B5Z8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-1A0A075B5Z8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm13241-201ENSMUST00000094493 780 ntBASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trav6-1A0A075B5Z8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-1A0A075B5Z8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms