Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm25724-201ENSMUST00000104531 117 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm15242-201ENSMUST00000122459 283 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm25556-201ENSMUST00000158077 144 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm9672-201ENSMUST00000166437 425 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm9167-201ENSMUST00000182469 962 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm27156-201ENSMUST00000184589 754 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm28117-201ENSMUST00000188472 371 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm43436-201ENSMUST00000199308 147 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm8479-201ENSMUST00000203825 718 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm45279-201ENSMUST00000210315 391 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm18601-201ENSMUST00000220831 634 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm25587-201ENSMUST00000082498 166 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Mir296-201ENSMUST00000083587 79 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm10540-201ENSMUST00000097581 276 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.27□□□□□ -1.41
Trim3Q9R1R2 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm26146-201ENSMUST00000104478 185 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm13768-201ENSMUST00000116469 929 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm5319-201ENSMUST00000118965 873 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm6987-201ENSMUST00000119319 428 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm14353-201ENSMUST00000122200 869 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm22552-201ENSMUST00000157796 337 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm24545-201ENSMUST00000158651 85 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm25574-201ENSMUST00000175245 249 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28739-201ENSMUST00000185415 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28219-201ENSMUST00000185452 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28542-201ENSMUST00000185545 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28303-201ENSMUST00000185642 747 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29244-201ENSMUST00000185825 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29437-201ENSMUST00000185865 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29412-201ENSMUST00000185869 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28910-201ENSMUST00000185921 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28812-201ENSMUST00000185963 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29468-201ENSMUST00000185978 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28335-201ENSMUST00000186204 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28854-201ENSMUST00000186218 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28636-201ENSMUST00000186353 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28452-201ENSMUST00000186623 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29298-201ENSMUST00000186704 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28185-201ENSMUST00000186815 694 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28227-201ENSMUST00000186862 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28796-201ENSMUST00000186905 696 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms