Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm15596-201ENSMUST00000121139 784 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm14796-201ENSMUST00000121216 959 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm8722-201ENSMUST00000121466 769 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm5809-201ENSMUST00000121854 529 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm14847-201ENSMUST00000121978 519 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm12778-201ENSMUST00000122341 333 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm11434-201ENSMUST00000122379 629 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm8089-201ENSMUST00000122463 968 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Mir1900-201ENSMUST00000122714 78 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm20128-201ENSMUST00000196189 417 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm43772-201ENSMUST00000202052 379 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm45279-201ENSMUST00000210315 391 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Mir425-201ENSMUST00000083645 85 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdc40Q9DC48 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdc40Q9DC48 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm14865-201ENSMUST00000117523 494 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm13237-201ENSMUST00000122151 635 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Mir1907-201ENSMUST00000122509 90 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm25722-201ENSMUST00000157498 279 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm23756-201ENSMUST00000157582 114 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm23031-201ENSMUST00000157998 119 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm21877-201ENSMUST00000185640 694 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm29464-201ENSMUST00000187692 513 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm29470-201ENSMUST00000188007 696 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm29141-201ENSMUST00000190357 882 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm44374-201ENSMUST00000199821 140 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm18012-201ENSMUST00000204558 773 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm44705-201ENSMUST00000206719 339 ntBASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdc40Q9DC48 Gm17950-201ENSMUST00000214617 646 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms