Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Krt88Q9CPR6 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Krt88Q9CPR6 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Krt88Q9CPR6 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Krt88Q9CPR6 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Krt88Q9CPR6 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Krt88Q9CPR6 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.91□□□□□ -1.46
Krt88Q9CPR6 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Krt88Q9CPR6 AU020206-202ENSMUST00000206358 3009 ntBASIC5.91□□□□□ -1.46
Krt88Q9CPR6 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm43775-201ENSMUST00000201019 3395 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm23527-201ENSMUST00000104570 130 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm13486-201ENSMUST00000119910 282 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm22025-201ENSMUST00000122734 302 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm25057-201ENSMUST00000157366 88 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm25574-201ENSMUST00000175245 249 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm4308-201ENSMUST00000179735 914 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm45319-201ENSMUST00000210220 318 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm32899-201ENSMUST00000219694 207 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm4796-201ENSMUST00000219802 624 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 CT030260.1-201ENSMUST00000223243 442 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gcnt2-204ENSMUST00000223570 335 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 AC133598.2-201ENSMUST00000224302 624 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Diaph3-204ENSMUST00000226254 682 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gm24451-201ENSMUST00000083353 133 ntBASIC5.9□□□□□ -1.46
Krt88Q9CPR6 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Gm10307-201ENSMUST00000189839 1337 ntBASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.9□□□□□ -1.47
Krt88Q9CPR6 AC159624.1-201ENSMUST00000217762 1344 ntBASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Gm10601-201ENSMUST00000120436 1422 ntBASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 AC187103.1-201ENSMUST00000224641 1475 ntBASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Krt88Q9CPR6 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Gm14279-201ENSMUST00000117142 332 ntBASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Gm12874-201ENSMUST00000117190 913 ntBASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Gm10243-201ENSMUST00000117571 333 ntBASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Gm14201-201ENSMUST00000117627 289 ntBASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Gm11926-201ENSMUST00000118520 430 ntBASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Gm8916-201ENSMUST00000119732 949 ntBASIC5.89□□□□□ -1.47
Krt88Q9CPR6 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms