Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Sprr2a2-201ENSMUST00000071805 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Cep112-206ENSMUST00000130515 3395 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm9165-201ENSMUST00000208467 2044 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm3616-201ENSMUST00000174430 2514 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm3683-201ENSMUST00000175701 2513 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Chrm1-201ENSMUST00000035444 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Eml1-202ENSMUST00000109857 2627 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Tnf-202ENSMUST00000167924 1462 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Vmn2r53-201ENSMUST00000170412 2421 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm20236-201ENSMUST00000193037 4540 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm37094-201ENSMUST00000193352 4540 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Ncaph2-201ENSMUST00000036987 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm16205-201ENSMUST00000117720 1027 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm15364-201ENSMUST00000119618 585 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm13170-201ENSMUST00000119716 643 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm14855-201ENSMUST00000119925 192 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm14141-201ENSMUST00000120236 783 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm15480-201ENSMUST00000120442 519 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm11498-201ENSMUST00000120660 949 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm11209-201ENSMUST00000130206 431 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Snora81-201ENSMUST00000157310 178 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm16566-201ENSMUST00000160387 910 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm4134-201ENSMUST00000173244 563 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm5181-201ENSMUST00000183140 971 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm18505-201ENSMUST00000187360 790 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm21856-201ENSMUST00000187547 696 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 1700049E22Rik-201ENSMUST00000187986 507 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm29470-201ENSMUST00000188007 696 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm28952-201ENSMUST00000189285 681 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm21735-201ENSMUST00000190360 696 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm36398-201ENSMUST00000192255 696 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm37746-201ENSMUST00000193249 198 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm20926-201ENSMUST00000194457 696 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm30312-201ENSMUST00000194516 696 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm43541-201ENSMUST00000197208 581 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm43560-201ENSMUST00000198100 773 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm42605-201ENSMUST00000199565 385 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm44267-201ENSMUST00000204132 385 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm45877-201ENSMUST00000212110 564 ntTSL 3 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 AC069561.3-201ENSMUST00000217321 114 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm18696-201ENSMUST00000220103 274 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 AC154552.4-201ENSMUST00000222171 151 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 AC124433.2-201ENSMUST00000223867 291 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Cacna2d3-208ENSMUST00000225985 918 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 AC140406.2-201ENSMUST00000227539 481 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Ccl17-201ENSMUST00000034232 514 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Mir325-201ENSMUST00000083491 98 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 AC156802.2-201ENSMUST00000225239 5740 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 CT025675.1-201ENSMUST00000228171 1567 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Zfp672-203ENSMUST00000065533 2619 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm43910-201ENSMUST00000204561 3241 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Gm18248-201ENSMUST00000191164 1846 ntBASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Pcdhb17Q91VD8 Ugt8a-201ENSMUST00000057944 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Gatad2b-201ENSMUST00000049382 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Golm1-202ENSMUST00000095739 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 4732419C18Rik-201ENSMUST00000181805 3536 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 CU024890.1-201ENSMUST00000221361 2019 ntBASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Gm27509-201ENSMUST00000102400 79 ntBASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Igkv2-112-202ENSMUST00000103319 358 ntAPPRIS ALT2 BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Gm13890-201ENSMUST00000117578 390 ntBASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Gm15840-201ENSMUST00000122099 943 ntBASIC9.09□□□□□ -0.95
Pcdhb17Q91VD8 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms