Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm22781-201ENSMUST00000104083 137 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm23834-201ENSMUST00000104436 129 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm12937-201ENSMUST00000118333 448 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm12104-201ENSMUST00000120359 979 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Mir6348-201ENSMUST00000183804 120 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29048-201ENSMUST00000185342 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29403-201ENSMUST00000185491 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28234-201ENSMUST00000185657 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28248-201ENSMUST00000186093 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29633-202ENSMUST00000186217 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28829-201ENSMUST00000186231 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28261-201ENSMUST00000186417 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28815-201ENSMUST00000186751 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28608-201ENSMUST00000186860 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28122-201ENSMUST00000187088 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28420-201ENSMUST00000187340 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28106-201ENSMUST00000187640 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28698-201ENSMUST00000187734 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29224-201ENSMUST00000187965 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29189-201ENSMUST00000188018 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29476-201ENSMUST00000188397 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29505-201ENSMUST00000188424 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28125-201ENSMUST00000188470 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29391-201ENSMUST00000188545 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29280-201ENSMUST00000188571 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28349-201ENSMUST00000188590 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29652-201ENSMUST00000188622 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28819-206ENSMUST00000188816 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29079-201ENSMUST00000188875 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28213-201ENSMUST00000189183 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29382-201ENSMUST00000189549 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29377-205ENSMUST00000189603 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28327-201ENSMUST00000189638 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28790-201ENSMUST00000189642 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28907-201ENSMUST00000189700 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29586-207ENSMUST00000189745 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29115-201ENSMUST00000189870 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28366-201ENSMUST00000190147 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29212-201ENSMUST00000190384 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29533-201ENSMUST00000190403 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28162-201ENSMUST00000190545 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29030-201ENSMUST00000190848 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28742-201ENSMUST00000191001 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28899-201ENSMUST00000191161 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29567-201ENSMUST00000191188 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28222-201ENSMUST00000191210 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28776-201ENSMUST00000191282 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29306-201ENSMUST00000191366 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29618-201ENSMUST00000191423 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28136-210ENSMUST00000191432 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29251-201ENSMUST00000191480 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28658-201ENSMUST00000191532 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm32180-201ENSMUST00000192415 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm30598-201ENSMUST00000192620 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm37627-201ENSMUST00000194585 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm34274-201ENSMUST00000195825 615 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm44243-201ENSMUST00000204323 692 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm5586-201ENSMUST00000206264 795 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm18907-201ENSMUST00000209719 932 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm15311-201ENSMUST00000119682 282 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm15305-201ENSMUST00000120354 288 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm24130-201ENSMUST00000158536 151 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm16113-201ENSMUST00000159629 372 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms