Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm44722-201ENSMUST00000206473 436 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm10126-201ENSMUST00000221732 168 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm22707-201ENSMUST00000103834 110 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14870-201ENSMUST00000118414 156 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14300-201ENSMUST00000120800 946 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm11383-201ENSMUST00000121346 807 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm15538-201ENSMUST00000121410 313 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm3242-201ENSMUST00000171273 485 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm18848-201ENSMUST00000182069 792 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Mir7685-201ENSMUST00000183555 62 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm44253-201ENSMUST00000203387 628 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm25007-201ENSMUST00000083808 133 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc28bQ8CEG5 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm22774-201ENSMUST00000102084 109 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm23529-201ENSMUST00000104562 132 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm12874-201ENSMUST00000117190 913 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13265-201ENSMUST00000118090 421 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13798-201ENSMUST00000118285 139 ntBASIC6.48□□□□□ -1.37
Ccdc28bQ8CEG5 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms