Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sh3rf2Q8BZT2 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Sh3rf2Q8BZT2 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sh3rf2Q8BZT2 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sh3rf2Q8BZT2 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.82□□□□□ -1.32
Sh3rf2Q8BZT2 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.82□□□□□ -1.32
Sh3rf2Q8BZT2 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Rnu11-201ENSMUST00000104135 134 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm24888-201ENSMUST00000104387 130 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm12507-201ENSMUST00000119155 415 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm7113-201ENSMUST00000120477 958 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm23674-201ENSMUST00000157473 131 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm25660-201ENSMUST00000158470 104 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm4152-201ENSMUST00000172675 259 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm20691-201ENSMUST00000176889 333 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm8480-201ENSMUST00000190350 698 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm5324-201ENSMUST00000208115 476 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm7731-201ENSMUST00000091759 470 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Olfr687-201ENSMUST00000098154 938 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.81□□□□□ -1.32
Sh3rf2Q8BZT2 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm11271-201ENSMUST00000116054 440 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm13930-201ENSMUST00000118569 368 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm13438-201ENSMUST00000120100 573 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm2986-201ENSMUST00000121603 382 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm8648-201ENSMUST00000122457 221 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm23426-201ENSMUST00000122483 318 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Mir6244-201ENSMUST00000184156 117 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm37490-201ENSMUST00000195566 724 ntBASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.8□□□□□ -1.32
Sh3rf2Q8BZT2 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 397 ms