Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm7492-201ENSMUST00000201745 725 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 AC154219.1-201ENSMUST00000220764 1262 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Grik1-209ENSMUST00000227986 2942 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm14935-201ENSMUST00000121528 1708 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm44620-201ENSMUST00000209183 2887 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 CT030185.1-201ENSMUST00000222940 2289 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm43181-201ENSMUST00000197001 2072 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 AU020206-202ENSMUST00000206358 3009 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm42568-201ENSMUST00000195639 1841 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm45297-201ENSMUST00000209893 3483 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm22953-201ENSMUST00000116724 101 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm13740-201ENSMUST00000120590 310 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm11233-201ENSMUST00000122357 634 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm23071-201ENSMUST00000158242 115 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm9499-201ENSMUST00000180888 964 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm27427-201ENSMUST00000185134 193 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm29385-201ENSMUST00000186831 363 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm28583-201ENSMUST00000188903 2141 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Igkv4-73-201ENSMUST00000199760 358 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm9240-201ENSMUST00000206527 742 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm5055-201ENSMUST00000215697 581 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 AC152169.2-201ENSMUST00000224558 613 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 AC168062.1-201ENSMUST00000228048 769 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Cma2-202ENSMUST00000228263 857 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm22053-201ENSMUST00000083394 200 ntBASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp40Q8BWR4 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Usp40Q8BWR4 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC9.15□□□□□ -0.95
Usp40Q8BWR4 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Usp40Q8BWR4 Gm21781-201ENSMUST00000178920 4838 ntBASIC9.15□□□□□ -0.95
Usp40Q8BWR4 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC9.15□□□□□ -0.95
Usp40Q8BWR4 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm15930-201ENSMUST00000156603 2037 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm4806-201ENSMUST00000222704 1690 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms