Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC9.28□□□□□ -0.92
Usp54Q8BL06 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Gm13013-201ENSMUST00000119087 523 ntBASIC9.28□□□□□ -0.92
Usp54Q8BL06 Gm11198-201ENSMUST00000119771 974 ntBASIC9.28□□□□□ -0.92
Usp54Q8BL06 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Gm27219-201ENSMUST00000184633 742 ntBASIC9.28□□□□□ -0.92
Usp54Q8BL06 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 AC140288.1-201ENSMUST00000226329 503 ntBASIC9.28□□□□□ -0.92
Usp54Q8BL06 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Gm24454-201ENSMUST00000083349 132 ntBASIC9.28□□□□□ -0.92
Usp54Q8BL06 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Usp54Q8BL06 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Usp54Q8BL06 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Usp54Q8BL06 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.92
Usp54Q8BL06 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Usp54Q8BL06 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Usp54Q8BL06 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC9.27□□□□□ -0.93
Usp54Q8BL06 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Grik1-209ENSMUST00000227986 2942 ntBASIC9.27□□□□□ -0.93
Usp54Q8BL06 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Gm8855-201ENSMUST00000118888 878 ntBASIC9.27□□□□□ -0.93
Usp54Q8BL06 Gm23662-201ENSMUST00000158046 111 ntBASIC9.27□□□□□ -0.93
Usp54Q8BL06 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Gm37203-201ENSMUST00000191618 385 ntBASIC9.27□□□□□ -0.93
Usp54Q8BL06 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Usp54Q8BL06 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 AC166358.5-201ENSMUST00000220706 1302 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm14356-201ENSMUST00000118322 869 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm6541-201ENSMUST00000165542 561 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm21756-201ENSMUST00000178380 930 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm21405-201ENSMUST00000179024 930 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm21191-201ENSMUST00000186484 930 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm29503-201ENSMUST00000191044 930 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm37609-201ENSMUST00000191778 678 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm37517-201ENSMUST00000194004 1289 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Mir6906-201ENSMUST00000198998 58 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 AC122393.2-201ENSMUST00000226404 1093 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 AC122251.2-201ENSMUST00000227341 603 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 CT025566.1-202ENSMUST00000224800 2511 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm38299-201ENSMUST00000193214 3789 ntBASIC9.26□□□□□ -0.93
Usp54Q8BL06 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp54Q8BL06 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms