Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm22655-201ENSMUST00000174949 96 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm27030-201ENSMUST00000182551 464 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm18700-201ENSMUST00000185791 553 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm38097-201ENSMUST00000192936 439 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm37072-201ENSMUST00000194570 837 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx55Q6ZPL9 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm16149-201ENSMUST00000117631 309 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm12507-201ENSMUST00000119155 415 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm6446-201ENSMUST00000120604 818 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm23207-201ENSMUST00000158665 102 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm27512-201ENSMUST00000175328 126 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm20691-201ENSMUST00000176889 333 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Mir6348-201ENSMUST00000183804 120 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm37857-201ENSMUST00000191784 1199 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm44361-201ENSMUST00000197960 94 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm46364-201ENSMUST00000218548 319 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx55Q6ZPL9 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.73□□□□□ -1.17
Ddx55Q6ZPL9 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 157.7 ms