Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm10568-201ENSMUST00000193244 1634 ntBASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim41Q5NCC3 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 AC122357.1-201ENSMUST00000221652 1515 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm37199-201ENSMUST00000193881 4065 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm12770-201ENSMUST00000121734 462 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm24343-201ENSMUST00000158708 111 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm7244-201ENSMUST00000164658 455 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm23018-201ENSMUST00000177928 109 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm28580-201ENSMUST00000186767 88 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm18797-201ENSMUST00000190809 1174 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm45446-201ENSMUST00000209348 216 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 AC116726.2-201ENSMUST00000217629 986 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 AC192333.1-201ENSMUST00000224573 376 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 AC160930.1-201ENSMUST00000227194 337 ntBASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim41Q5NCC3 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Smcr8-202ENSMUST00000102667 3544 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm14279-201ENSMUST00000117142 332 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm10243-201ENSMUST00000117571 333 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm5943-201ENSMUST00000119458 459 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm23007-201ENSMUST00000158951 177 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm37920-201ENSMUST00000192952 749 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 AC161275.1-201ENSMUST00000224668 208 ntBASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim41Q5NCC3 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim41Q5NCC3 Gm37159-201ENSMUST00000192720 3605 ntBASIC13.27□□□□□ -0.28
Trim41Q5NCC3 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim41Q5NCC3 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim41Q5NCC3 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trim41Q5NCC3 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC13.27□□□□□ -0.28
Trim41Q5NCC3 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim41Q5NCC3 Gm22671-201ENSMUST00000104420 134 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Mir467g-201ENSMUST00000116906 120 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms