Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Shmt1P50431 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.2□□□□□ -1.26
Shmt1P50431 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Snord88a-201ENSMUST00000116723 90 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm5601-201ENSMUST00000118909 972 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm15311-201ENSMUST00000119682 282 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm15305-201ENSMUST00000120354 288 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm14739-201ENSMUST00000120424 802 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm7494-201ENSMUST00000121248 441 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm23884-201ENSMUST00000122687 294 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm7613-201ENSMUST00000139070 487 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm23756-201ENSMUST00000157582 114 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm5871-201ENSMUST00000176461 718 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.2□□□□□ -1.26
Shmt1P50431 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm21392-201ENSMUST00000182950 972 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm18799-201ENSMUST00000189104 913 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm38068-201ENSMUST00000192546 540 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm33571-201ENSMUST00000193271 657 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm37614-201ENSMUST00000195645 210 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm43689-201ENSMUST00000195951 427 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm42708-201ENSMUST00000196332 905 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm45122-201ENSMUST00000206376 784 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gm18955-201ENSMUST00000223173 649 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Shmt1P50431 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Shmt1P50431 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Shmt1P50431 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Shmt1P50431 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.2□□□□□ -1.26
Shmt1P50431 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Shmt1P50431 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.2□□□□□ -1.26
Shmt1P50431 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.2□□□□□ -1.26
Shmt1P50431 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Shmt1P50431 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Shmt1P50431 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Shmt1P50431 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.19□□□□□ -1.26
Shmt1P50431 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm12931-201ENSMUST00000117046 324 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm12573-201ENSMUST00000118158 286 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm15158-201ENSMUST00000120577 570 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm4202-201ENSMUST00000169025 733 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm24812-201ENSMUST00000175315 284 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Shmt1P50431 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.19□□□□□ -1.26
Shmt1P50431 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm19185-201ENSMUST00000196365 643 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm43491-201ENSMUST00000197133 784 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm18012-201ENSMUST00000204558 773 ntBASIC7.19□□□□□ -1.26
Shmt1P50431 Gm44111-201ENSMUST00000204649 399 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms