Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Cdx2P43241 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Gm13006-201ENSMUST00000118683 214 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Gm22655-201ENSMUST00000174949 96 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm27512-201ENSMUST00000175328 126 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm18700-201ENSMUST00000185791 553 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Gm37349-201ENSMUST00000194205 624 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm37072-201ENSMUST00000194570 837 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm18805-201ENSMUST00000206872 655 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm18103-201ENSMUST00000216621 779 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdx2P43241 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdx2P43241 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.37□□□□□ -1.39
Cdx2P43241 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdx2P43241 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdx2P43241 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Cdx2P43241 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx2P43241 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdx2P43241 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cdx2P43241 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm12630-201ENSMUST00000121575 784 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Gm12754-201ENSMUST00000121908 454 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Gm25782-201ENSMUST00000122526 289 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm23225-201ENSMUST00000158121 114 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx2P43241 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm6055-201ENSMUST00000180532 378 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm37430-201ENSMUST00000193039 196 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx2P43241 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx2P43241 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx2P43241 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cdx2P43241 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.36□□□□□ -1.39
Cdx2P43241 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cdx2P43241 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Cdx2P43241 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx2P43241 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx2P43241 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Cdx2P43241 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms