Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm43618-201ENSMUST00000197392 3451 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm25919-201ENSMUST00000104271 132 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm13890-201ENSMUST00000117578 390 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm12768-201ENSMUST00000120055 759 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm25487-201ENSMUST00000158725 125 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm20778-201ENSMUST00000178524 627 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm8009-201ENSMUST00000191672 436 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm17824-201ENSMUST00000197690 805 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm2996-201ENSMUST00000211398 537 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.87□□□□□ -1.31
Cxcl12P40224 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Cxcl12P40224 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cxcl12P40224 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm13641-201ENSMUST00000117993 473 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm13265-201ENSMUST00000118090 421 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm22820-201ENSMUST00000157205 329 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm24179-201ENSMUST00000158925 127 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm22548-201ENSMUST00000174899 78 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm19560-201ENSMUST00000177510 514 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm25065-201ENSMUST00000177914 132 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm25891-201ENSMUST00000180050 132 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.86□□□□□ -1.31
Cxcl12P40224 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm18839-201ENSMUST00000204292 670 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm18838-201ENSMUST00000204855 886 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm45850-201ENSMUST00000212536 338 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.86□□□□□ -1.31
Cxcl12P40224 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.86□□□□□ -1.31
Cxcl12P40224 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.86□□□□□ -1.31
Cxcl12P40224 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.86□□□□□ -1.31
Cxcl12P40224 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cxcl12P40224 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms