Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LdlrP35951 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.83□□□□□ -1.32
LdlrP35951 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.83□□□□□ -1.32
LdlrP35951 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LdlrP35951 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.83□□□□□ -1.32
LdlrP35951 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
LdlrP35951 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LdlrP35951 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LdlrP35951 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.83□□□□□ -1.32
LdlrP35951 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LdlrP35951 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LdlrP35951 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Mir760-201ENSMUST00000103257 119 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Gm13423-201ENSMUST00000117205 888 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Anp32-ps-201ENSMUST00000118265 388 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm12713-201ENSMUST00000118404 764 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm12104-201ENSMUST00000120359 979 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm24057-201ENSMUST00000158616 302 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm22533-201ENSMUST00000158821 274 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm26570-201ENSMUST00000180672 342 ntBASIC6.82□□□□□ -1.32
LdlrP35951 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm29605-201ENSMUST00000190800 292 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm38079-201ENSMUST00000195603 154 ntBASIC6.82□□□□□ -1.32
LdlrP35951 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Gm45259-201ENSMUST00000209217 1006 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm18789-201ENSMUST00000216115 550 ntBASIC6.82□□□□□ -1.32
LdlrP35951 AC159476.2-201ENSMUST00000216221 418 ntBASIC6.82□□□□□ -1.32
LdlrP35951 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.82□□□□□ -1.32
LdlrP35951 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LdlrP35951 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.82□□□□□ -1.32
LdlrP35951 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LdlrP35951 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LdlrP35951 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LdlrP35951 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.82□□□□□ -1.32
LdlrP35951 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.81□□□□□ -1.32
LdlrP35951 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.81□□□□□ -1.32
LdlrP35951 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.81□□□□□ -1.32
LdlrP35951 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
LdlrP35951 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.81□□□□□ -1.32
LdlrP35951 Gm11972-201ENSMUST00000118514 389 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Gm15007-201ENSMUST00000119982 710 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Gm14713-201ENSMUST00000122362 686 ntBASIC6.81□□□□□ -1.32
LdlrP35951 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.81□□□□□ -1.32
LdlrP35951 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms